PUBLICATIONS JULY 1, 2020 - JUNE 30, 2021
- Project/Pilot Project Leaders
Awasthi S, Rahman N, Rui B, Kumar G, Awasthi V, Breshears M, Kosanke S. Lung and general health effects of Toll-like receptor-4 (TLR4)-interacting SPA4 peptide. BMC Pulm Med. 2020 Jun 23;20(1):179. doi: 10.1186/s12890-020-01187-7. PMID: 32576172; PMCID: PMC7310322.
Awasthi V, Vilekar P, Rao G, Awasthi S. Anti-inflammatory mediators ST2 and SIGIRR are induced by diphenyldifluoroketone EF24 in lipopolysaccharide-stimulated dendritic cells. Immunobiology. 2020 Mar;225(2):151886. doi: 10.1016/j.imbio.2019.11.021. Epub 2019 Nov 29. PMID: 31812341; PMCID: PMC7198325.
Yari H, Gali H, Awasthi V. Nanoparticles for Targeting of Prostate Cancer. Curr Pharm Des. 2020;26(42):5393-5413. doi: 10.2174/1381612826666200721001500. PMID: 32693761.
Lagisetty P, Eeda V, Yadav VR, Nimmo SL, Subramaniam D, Powell DR, Awasthi V. Tumor suppressive activities of solvatochromic 3,3'-azadimethylene dinaphthospiropyran in colon cancer model. Chem Biol Drug Des. 2021 Feb;97(2):325-340. doi: 10.1111/cbdd.13785. Epub 2020 Sep 17. PMID: 32909340.
Sundriyal S, Eeda V, Lagisetty P, Awasthi V. Tubulin inhibitory activity of a novel colchicine-binding compounds based on a dinaphthospiropyranran scaffold. Bioorg Med Chem. 2021 Jan 1;29:115874. doi: 10.1016/j.bmc.2020.115874. Epub 2020 Nov 16. PMID: 33223461.
Houson H, Mdzinarishvili A, Gali H, Sidorov E, Awasthi V. PET Detection of Cerebral Necrosis Using an Infarct-Avid Agent 2-Deoxy-2-[18F]Fluoro-D-Glucaric Acid (FGA) in a Mouse Model of the Brain Stroke. Mol Imaging Biol. 2020 Oct;22(5):1353-1361. doi: 10.1007/s11307-020-01513-9. PMID: 32557188; PMCID: PMC7494640.
Gagliardi A, Giuliano E, Venkateswararao E, Fresta M, Bulotta S, Awasthi V, Cosco D. Biodegradable Polymeric Nanoparticles for Drug Delivery to Solid Tumors. Front Pharmacol. 2021 Feb 3;12:601626. doi: 10.3389/fphar.2021.601626. PMID: 33613290; PMCID: PMC7887387.
Houson H, Hedrick A, Awasthi V. Drug-induced cardiomyopathy: Characterization of a rat model by [(18)F]FDG/PET and [(99m)Tc]MIBI/SPECT. 2020 Oct 10. Peer-reviewed Manuscript.
Terzyan SS, Nguyen LT, Burgett AWG, Heroux A, Smith CA, You Y, Hanigan MH. Crystal structures of glutathione- and inhibitor-bound human GGT1: critical interactions within the cysteinylglycine binding site. J Biol Chem. 2021 Jan-Jun;296:100066. doi: 10.1074/jbc.RA120.016265. Epub 2020 Nov 22. PMID: 33187988; PMCID: PMC7949050.
Gardner ED, Dimas DA, Finneran MC, Brown SM, Burgett AW, Singh S. Indole C6 Functionalization of Tryprostatin B Using Prenyltransferase CdpNPT. Catalysts. 2020 Nov;10(11):1247. doi: 10.3390/catal10111247. Epub 2020 Oct 28. PMID: 33643664; PMCID: PMC7906295.
Bensen RC, Standke SJ, Colby DH, Kothapalli NR, Le-McClain AT, Patten MA, Tripathi A, Heinlen JE, Yang Z, Burgett AWG. Single Cell Mass Spectrometry Quantification of Anticancer Drugs: Proof of Concept in Cancer Patients. ACS Pharmacol Transl Sci. 2021 Jan 5;4(1):96-100. doi: 10.1021/acsptsci.0c00156. PMID: 33615163; PMCID: PMC7887743.
Lee S, Channappanavar R, Kanneganti TD. Coronaviruses: Innate Immunity, Inflammasome Activation, Inflammatory Cell Death, and Cytokines. Trends Immunol. 2020 Dec;41(12):1083-1099. doi: 10.1016/j.it.2020.10.005. Epub 2020 Oct 15. PMID: 33153908; PMCID: PMC7561287.
Channappanavar R, Perlman S. Age-related susceptibility to coronavirus infections: role of impaired and dysregulated host immunity. J Clin Invest. 2020 Dec 1;130(12):6204-6213. doi: 10.1172/JCI144115. PMID: 33085654; PMCID: PMC7685716.
Zheng M, Williams EP, Malireddi RKS, Karki R, Banoth B, Burton A, Webby R, Channappanavar R, Jonsson CB, Kanneganti TD. Impaired NLRP3 inflammasome activation/pyroptosis leads to robust inflammatory cell death via caspase-8/RIPK3 during coronavirus infection. J Biol Chem. 2020 Oct 9;295(41):14040-14052. doi: 10.1074/jbc.RA120.015036. Epub 2020 Aug 6. PMID: 32763970; PMCID: PMC7549031.
Li K, Li Z, Wohlford-Lenane C, Meyerholz DK, Channappanavar R, An D, Perlman S, McCray PB Jr, He B. Single-Dose, Intranasal Immunization with Recombinant Parainfluenza Virus 5 Expressing Middle East Respiratory Syndrome Coronavirus (MERS-CoV) Spike Protein Protects Mice from Fatal MERS-CoV Infection. mBio. 2020 Apr 7;11(2):e00554-20. doi: 10.1128/mBio.00554-20. PMID: 32265331; PMCID: PMC7157776.
Channappanavar R, Perlman S. Evaluation of Activation and Inflammatory Activity of Myeloid Cells During Pathogenic Human Coronavirus Infection. Methods Mol Biol. 2020;2099:195-204. doi: 10.1007/978-1-0716-0211-9_15. PMID: 31883097; PMCID: PMC7123665.
Wang J, Lyu W, Zhang W, Chen Y, Luo F, Wang Y, Ji H, Zhang G. Discovery of natural products capable of inducing porcine host defense peptide gene expression using cell-based high throughput screening. J Anim Sci Biotechnol. 2021 Jan 11;12(1):14. doi: 10.1186/s40104-020-00536-0. PMID: 33431034; PMCID: PMC7798283.
Davis MS, Barrett MR. Effect of conditioning and physiological hyperthermia on canine skeletal muscle mitochondrial oxygen consumption. J Appl Physiol (1985). 2021 May 1;130(5):1317-1325. doi: 10.1152/japplphysiol.00969.2020. Epub 2021 Mar 4. PMID: 33661725.
von Pfeil DJF, Davis MS, Liska WD, George C, Secrest S. Orthopedic and ultrasonographic examination findings in 128 shoulders of 64 ultra-endurance Alaskan sled dogs. Vet Surg. 2021 May;50(4):794-806. doi: 10.1111/vsu.13621. Epub 2021 Mar 8. PMID: 33684250.
Haussler KK, Wilde SR, Davis MS, Hess AM, McIlwraith CW. Contrast therapy: Tissue heating and cooling properties within the equine distal limb. Equine Vet J. 2021 Jan;53(1):149-156. doi: 10.1111/evj.13278. Epub 2020 May 29. PMID: 32386069.
Jia H, Xue S, Lei L, Fan M, Peng S, Li T, Nagarajan R, Carver B, Ma Z, Deng J, Yan L. A semi-dominant NLR allele causes whole-seedling necrosis in wheat. Plant Physiol. 2021 Feb 12;186(1):483–96. doi: 10.1093/plphys/kiab058. Epub ahead of print. PMID: 33576803; PMCID: PMC8154059.
Feng Y, Marchal T, Sperry T, Yi H. Influence of wind and relative humidity on the social distancing effectiveness to prevent COVID-19 airborne transmission: A numerical study. J Aerosol Sci. 2020 Sep;147:105585. doi: 10.1016/j.jaerosci.2020.105585. Epub 2020 May 18. PMID: 32427227; PMCID: PMC7233256.
Kolewe EL, Feng Y, Fromen CA. Realizing Lobe-Specific Aerosol Targeting in a 3D-Printed In Vitro Lung Model. J Aerosol Med Pulm Drug Deliv. 2021 Feb;34(1):42-56. doi: 10.1089/jamp.2019.1564. Epub 2020 Jul 14. PMID: 32678723.
Chen X, Zhou X, Xia X, Xie X, Lu P, Feng Y. Modeling of the transport, hygroscopic growth, and deposition of multi-component droplets in a simplified airway with realistic thermal boundary conditions. J Aerosol Sci. 2021 Jan;151:105626. doi: 10.1016/j.jaerosci.2020.105626. Epub 2020 Jul 24. PMID: 32836373; PMCID: PMC7378524.
Mahjabeen S, Hatipoglu MK, Kosanke SD, Garcia-Contreras D, Benbrook DM, Garcia-Contreras L. Vaginal Suppositories Containing SHetA2 to Treat Cervical Dysplasia: Pharmacokinetics of Daily Doses and Preliminary Safety Profile. J Pharm Sci. 2020 Jun;109(6):2000-2008. doi: 10.1016/j.xphs.2020.02.016. Epub 2020 Feb 27. PMID: 32113976; PMCID: PMC7247943.
Garcia-Contreras, L., Agrawal, S. Once a Week Inhalation of OHet72 Nanosuspensions: A New Weapon against Tuberculosis. 2020 Apr 26. Peer-reviewed Manuscript.
Matsuo J, Kikukawa T, Fujisawa T, Hoff WD, Unno M. "Watching" a Molecular Twist in a Protein by Raman Optical Activity. J Phys Chem Lett. 2020 Oct 15;11(20):8579-8584. doi: 10.1021/acs.jpclett.0c02448. Epub 2020 Sep 25. PMID: 32945678.
Campolo A, Frantz MW, de Laat MA, Hartson SD, Furr MO, Lacombe VA. Differential Proteomic Expression of Equine Cardiac and Lamellar Tissue During Insulin-Induced Laminitis. Front Vet Sci. 2020 Jun 12;7:308. doi: 10.3389/fvets.2020.00308. PMID: 32596266; PMCID: PMC7303262.
Wu L, Guo X, Wong SY, Lu P, Hartson SD, Medeiros DM, Wang W, Clarke SL, Lucas EA, Smith BJ, Chowanadisai W, Lin D. Deficiency of β-carotene oxygenase 2 induces mitochondrial fragmentation and activates the STING-IRF3 pathway in the mouse hypothalamus. J Nutr Biochem. 2021 Feb;88:108542. doi: 10.1016/j.jnutbio.2020.108542. Epub 2020 Oct 29. PMID: 33129969.
Greenway R, Barts N, Henpita C, Brown AP, Arias Rodriguez L, Rodríguez Peña CM, Arndt S, Lau GY, Murphy MP, Wu L, Lin D, Tobler M, Kelley JL, Shaw JH. Convergent evolution of conserved mitochondrial pathways underlies repeated adaptation to extreme environments. Proc Natl Acad Sci U S A. 2020 Jul 14;117(28):16424-16430. doi: 10.1073/pnas.2004223117. Epub 2020 Jun 25. Erratum in: Proc Natl Acad Sci U S A. 2020 Aug 17;: PMID: 32586956; PMCID: PMC7368198.
Strong MD, Hart MD, Tang TZ, Ojo BA, Wu L, Nacke MR, Agidew WT, Hwang HJ, Hoyt PR, Bettaieb A, Clarke SL, Smith BJ, Stoecker BJ, Lucas EA, Lin D, Chowanadisai W. Role of zinc transporter ZIP12 in susceptibility-weighted brain magnetic resonance imaging (MRI) phenotypes and mitochondrial function. FASEB J. 2020 Sep;34(9):10702-12725. doi: 10.1096/fj.202000772R. Epub 2020 Jul 27. PMID: 32716562.
Wu L, Guo X, Wong SY, Lu P, Hartson SD, Medeiros DM, Wang W, Clarke SL, Lucas EA, Smith BJ, Chowanadisai W, Lin D. Deficiency of β-carotene oxygenase 2 induces mitochondrial fragmentation and activates the STING-IRF3 pathway in the mouse hypothalamus. J Nutr Biochem. 2021 Feb;88:108542. doi: 10.1016/j.jnutbio.2020.108542. Epub 2020 Oct 29. PMID: 33129969.
Mares SE, King MM, Kubo A, Khanov AA, Lutter EI, Youssef N, Patrauchan MA. carP, encoding a Ca2+-regulated putative phytase, is evolutionarily conserved in Pseudomonas aeruginosa and has potential as a biomarker. Microbiology (Reading). 2021 Feb;167(2):001004. doi: 10.1099/mic.0.001004. PMID: 33295862; PMCID: PMC8131022.
Sah P, Lutter EI. Hijacking and Use of Host Kinases by Chlamydiae. Pathogens. 2020 Dec 10;9(12):1034. doi: 10.3390/pathogens9121034. PMID: 33321710; PMCID: PMC7763869.
Ashar HK, Pulavendran S, Rudd JM, Maram P, Achanta M, Chow VTK, Malayer JR, Snider TA, Teluguakula N. Administration of a CXC Chemokine Receptor 2 (CXCR2) Antagonist, SCH527123, Together with Oseltamivir Suppresses NETosis and Protects Mice from Lethal Influenza and Piglets from Swine-Influenza Infection. Am J Pathol. 2021 Apr;191(4):669-685. doi: 10.1016/j.ajpath.2020.12.013. Epub 2021 Jan 14. PMID: 33453177; PMCID: PMC8027923.
More S, Narayanan S, Patil G, Ghosh P, Pushparaj S, Cooper E, Ritchey J, Cheruvu VK, Kaul A, Ramachandran A. Pooling of Nasopharyngeal Swab Samples To Overcome a Global Shortage of Real-Time Reverse Transcription-PCR COVID-19 Test Kits. J Clin Microbiol. 2021 Mar 19;59(4):e01295-20. doi: 10.1128/JCM.01295-20. PMID: 33500363; PMCID: PMC8092752.
More S, Narayanan S, Patil G, Ghosh P, Pushparaj S, Cooper E, Ritchey J, Cheruvu VK, Kaul A, Ramachandran A. Pooling of Nasopharyngeal Swab Samples To Overcome a Global Shortage of Real-Time Reverse Transcription-PCR COVID-19 Test Kits. J Clin Microbiol. 2021 Mar 19;59(4):e01295-20. doi: 10.1128/JCM.01295-20. PMID: 33500363; PMCID: PMC8092752.
Narasaraju T. Histopathologic Changes and SARS-CoV-2 Immunostaining in the Lung of a Patient With COVID-19. Ann Intern Med. 2020 Aug 18;173(4):323-324. doi: 10.7326/L20-0894. PMID: 32805179.
Narasaraju T, Tang BM, Herrmann M, Muller S, Chow VTK, Radic M. Neutrophilia and NETopathy as Key Pathologic Drivers of Progressive Lung Impairment in Patients With COVID-19. Front Pharmacol. 2020 Jun 5;11:870. doi: 10.3389/fphar.2020.00870. PMID: 32581816; PMCID: PMC7291833.
Chirkova T, Ha B, Rimawi BH, Oomens AGP, Hartert TV, Anderson LJ. In vitro model for the assessment of human immune responses to subunit RSV vaccines. PLoS One. 2020 Mar 19;15(3):e0229660. doi: 10.1371/journal.pone.0229660. PMID: 32191728; PMCID: PMC7081972.
Liu J, Hester K, Pope C. Dose- and time-related effects of acute diisopropylfluorophosphate intoxication on forced swim behavior and sucrose preference in rats. Neurotoxicology. 2021 Jan;82:82-88. doi: 10.1016/j.neuro.2020.11.007. Epub 2020 Nov 21. PMID: 33232745.
Van Orden MJ, Newsom S, Rajan R. CRISPR type II-A subgroups exhibit phylogenetically distinct mechanisms for prespacer insertion. J Biol Chem. 2020 Aug 7;295(32):10956-10968. doi: 10.1074/jbc.RA120.013554. Epub 2020 Jun 8. PMID: 32513871; PMCID: PMC7415960.
Chan CW, Badong D, Rajan R, Mondragón A. Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs. RNA. 2020 Mar;26(3):278-289. doi: 10.1261/rna.073478.119. Epub 2019 Dec 17. PMID: 31848215; PMCID: PMC7025506.
Newsom S, Parameshwaran HP, Martin L, Rajan R. The CRISPR-Cas Mechanism for Adaptive Immunity and Alternate Bacterial Functions Fuels Diverse Biotechnologies. Front Cell Infect Microbiol. 2021 Jan 28;10:619763. doi: 10.3389/fcimb.2020.619763. PMID: 33585286; PMCID: PMC7876343.
Parameshwaran HP, Babu K, Tran C, Guan K, Allen A, Kathiresan V, Qin PZ, Rajan R. The bridge helix of Cas12a imparts selectivity in cis-DNA cleavage and regulates trans-DNA cleavage. FEBS Lett. 2021 Apr;595(7):892-912. doi: 10.1002/1873-3468.14051. Epub 2021 Feb 28. PMID: 33523494; PMCID: PMC8044059.
Gorbet MJ, Ranjan A. Cancer immunotherapy with immunoadjuvants, nanoparticles, and checkpoint inhibitors: Recent progress and challenges in treatment and tracking response to immunotherapy. Pharmacol Ther. 2020 Mar;207:107456. doi: 10.1016/j.pharmthera.2019.107456. Epub 2019 Dec 19. PMID: 31863820; PMCID: PMC7039751.
Gorbet MJ, Singh A, Mao C, Fiering S, Ranjan A. Using nanoparticles for in situ vaccination against cancer: mechanisms and immunotherapy benefits. Int J Hyperthermia. 2020 Dec;37(3):18-33. doi: 10.1080/02656736.2020.1802519. PMID: 33426995; PMCID: PMC7808276.
Mao C, Gorbet MJ, Singh A, Ranjan A, Fiering S. In situ vaccination with nanoparticles for cancer immunotherapy: understanding the immunology. Int J Hyperthermia. 2020 Dec;37(3):4-17. doi: 10.1080/02656736.2020.1810333. PMID: 33455477; PMCID: PMC8189648.
Saha P, Sikdar S, Krishnamoorthy G, Zgurskaya HI, Rybenkov VV. Drug Permeation against Efflux by Two Transporters. ACS Infect Dis. 2020 Apr 10;6(4):747-758. doi: 10.1021/acsinfecdis.9b00510. Epub 2020 Feb 25. PMID: 32039579; PMCID: PMC7150640.
Mansbach RA, Leus IV, Mehla J, Lopez CA, Walker JK, Rybenkov VV, Hengartner NW, Zgurskaya HI, Gnanakaran S. Machine Learning Algorithm Identifies an Antibiotic Vocabulary for Permeating Gram-Negative Bacteria. J Chem Inf Model. 2020 Jun 22;60(6):2838-2847. doi: 10.1021/acs.jcim.0c00352. Epub 2020 Jun 9. PMID: 32453589; PMCID: PMC7768862.
Zhao H, Bhowmik BK, Petrushenko ZM, Rybenkov VV. Alternating Dynamics of oriC, SMC, and MksBEF in Segregation of Pseudomonas aeruginosa Chromosome. mSphere. 2020 Sep 9;5(5):e00238-20. doi: 10.1128/mSphere.00238-20. PMID: 32907947; PMCID: PMC7485682.
Mehla J, Malloci G, Mansbach R, López CA, Tsivkovski R, Haynes K, Leus IV, Grindstaff SB, Cascella RH, D'Cunha N, Herndon L, Hengartner NW, Margiotta E, Atzori A, Vargiu AV, Manrique PD, Walker JK, Lomovskaya O, Ruggerone P, Gnanakaran S, Rybenkov VV, Zgurskaya HI. Predictive Rules of Efflux Inhibition and Avoidance in Pseudomonas aeruginosa. mBio. 2021 Jan 19;12(1):e02785-20. doi: 10.1128/mBio.02785-20. PMID: 33468691; PMCID: PMC7845643.
Zgurskaya HI, Walker JK, Parks JM, Rybenkov VV. Multidrug Efflux Pumps and the Two-Faced Janus of Substrates and Inhibitors. Acc Chem Res. 2021 Feb 16;54(4):930-939. doi: 10.1021/acs.accounts.0c00843. Epub 2021 Feb 4. PMID: 33539084; PMCID: PMC8208102.
Rybenkov VV, Zgurskaya HI, Ganguly C, Leus IV, Zhang Z, Moniruzzaman M. The Whole Is Bigger than the Sum of Its Parts: Drug Transport in the Context of Two Membranes with Active Efflux. Chem Rev. 2021 May 12;121(9):5597-5631. doi: 10.1021/acs.chemrev.0c01137. Epub 2021 Feb 17. PMID: 33596653; PMCID: PMC8369882.
Schroeder SJ. Perspectives on Viral RNA Genomes and the RNA Folding Problem. Viruses. 2020 Oct 5;12(10):1126. doi: 10.3390/v12101126. PMID: 33027988; PMCID: PMC7600889.
Schlick T, Sundberg EJ, Schroeder SJ, Babu MM. Biophysicists' outstanding response to Covid-19. Biophys J. 2021 Mar 16;120(6):E1-E2. doi: 10.1016/j.bpj.2021.02.020. Epub 2021 Mar 4. PMID: 33689685; PMCID: PMC7931721.
Hanafy RA, Johnson B, Youssef NH, Elshahed MS. Assessing anaerobic gut fungal diversity in herbivores using D1/D2 large ribosomal subunit sequencing and multi-year isolation. Environ Microbiol. 2020 Sep;22(9):3883-3908. doi: 10.1111/1462-2920.15164. Epub 2020 Aug 11. PMID: 32656919.
Hanafy RA, Lanjekar VB, Dhakephalkar PK, Callaghan TM, Dagar SS, Griffith GW, Elshahed MS, Youssef NH. Seven new Neocallimastigomycota genera from wild, zoo-housed, and domesticated herbivores greatly expand the taxonomic diversity of the phylum. Mycologia. 2020 Nov-Dec;112(6):1212-1239. doi: 10.1080/00275514.2019.1696619. Epub 2020 Feb 14. PMID: 32057282.
Stabel M, Hanafy RA, Schweitzer T, Greif M, Aliyu H, Flad V, Young D, Lebuhn M, Elshahed MS, Ochsenreither K, Youssef NH. Aestipascuomycesdupliciliberans gen. nov, sp. nov., the First Cultured Representative of the Uncultured SK4 Clade from Aoudad Sheep and Alpaca. Microorganisms. 2020 Nov 5;8(11):1734. doi: 10.3390/microorganisms8111734. PMID: 33167420; PMCID: PMC7694369.
Yadav A, Vilcáez J, Farag IF, Johnson B, Mueller K, Youssef NH, Elshahed MS. Candidatus Mcinerneyibacterium aminivorans gen. nov., sp. nov., the first representative of the candidate phylum Mcinerneyibacteriota phyl. nov. recovered from a high temperature, high salinity tertiary oil reservoir in north central Oklahoma, USA. Syst Appl Microbiol. 2020 Mar;43(2):126057. doi: 10.1016/j.syapm.2020.126057. Epub 2020 Jan 22. PMID: 31987701.
- Mentor/Core Directors
Popescu NI, Keshari RS, Cochran J, Coggeshall KM, Lupu F. C3 Opsonization of Anthrax Bacterium and Peptidoglycan Supports Recognition and Activation of Neutrophils. Microorganisms. 2020 Jul 13;8(7):1039. doi: 10.3390/microorganisms8071039. PMID: 32668703; PMCID: PMC7409185.
King M, Kubo A, Kafer L, Braga R, McLeod D, Khanam S, Conway T, Patrauchan MA. Calcium-Regulated Protein CarP Responds to Multiple Host Signals and Mediates Regulation of Pseudomonas aeruginosa Virulence by Calcium. Appl Environ Microbiol. 2021 Apr 27;87(10):e00061-21. doi: 10.1128/AEM.00061-21. PMID: 33674436; PMCID: PMC8117776.
Wu L, Lyu Y, Srinivasagan R, Wu J, Ojo B, Tang M, El-Rassi GD, Metzinger K, Smith BJ, Lucas EA, Clarke SL, Chowanadisai W, Shen X, He H, Conway T, von Lintig J, Lin D. Astaxanthin-Shifted Gut Microbiota Is Associated with Inflammation and Metabolic Homeostasis in Mice. J Nutr. 2020 Oct 12;150(10):2687-2698. doi: 10.1093/jn/nxaa222. PMID: 32810865; PMCID: PMC8023541.
Wu L, Lyu Y, Srinivasagan R, Wu J, Ojo B, Tang M, El-Rassi GD, Metzinger K, Smith BJ, Lucas EA, Clarke SL, Chowanadisai W, Shen X, He H, Conway T, von Lintig J, Lin D. Astaxanthin-Shifted Gut Microbiota Is Associated with Inflammation and Metabolic Homeostasis in Mice. J Nutr. 2020 Oct 12;150(10):2687-2698. doi: 10.1093/jn/nxaa222. PMID: 32810865; PMCID: PMC8023541.
King M, Kubo A, Kafer L, Braga R, McLeod D, Khanam S, Conway T, Patrauchan MA. Calcium-Regulated Protein CarP Responds to Multiple Host Signals and Mediates Regulation of Pseudomonas aeruginosa Virulence by Calcium. Appl Environ Microbiol. 2021 Apr 27;87(10):e00061-21. doi: 10.1128/AEM.00061-21. PMID: 33674436; PMCID: PMC8117776.
Wu L, Lyu Y, Srinivasagan R, Wu J, Ojo B, Tang M, El-Rassi GD, Metzinger K, Smith BJ, Lucas EA, Clarke SL, Chowanadisai W, Shen X, He H, Conway T, von Lintig J, Lin D. Astaxanthin-Shifted Gut Microbiota Is Associated with Inflammation and Metabolic Homeostasis in Mice. J Nutr. 2020 Oct 12;150(10):2687-2698. doi: 10.1093/jn/nxaa222. PMID: 32810865; PMCID: PMC8023541.
King MM, Kayastha BB, Franklin MJ, Patrauchan MA. Calcium Regulation of Bacterial Virulence. Adv Exp Med Biol. 2020;1131:827-855. doi: 10.1007/978-3-030-12457-1_33. PMID: 31646536; PMCID: PMC7473484.
King MM, Kayastha BB, Franklin MJ, Patrauchan MA. Calcium Regulation of Bacterial Virulence. Adv Exp Med Biol. 2020;1131:827-855. doi: 10.1007/978-3-030-12457-1_33. PMID: 31646536; PMCID: PMC7473484.
Franklin MJ, Sandvik E, Yanardag S, Williamson KS. Functional Characterization of the Pseudomonas aeruginosa Ribosome Hibernation-Promoting Factor. J Bacteriol. 2020 Sep 8;202(19):e00280-20. doi: 10.1128/JB.00280-20. PMID: 32900865; PMCID: PMC7484188.
Theng S, Williamson KS, Franklin MJ. Role of Hibernation Promoting Factor in Ribosomal Protein Stability during Pseudomonas aeruginosa Dormancy. Int J Mol Sci. 2020 Dec 14;21(24):9494. doi: 10.3390/ijms21249494. PMID: 33327444; PMCID: PMC7764885.
Potter DA, Herrera-Ponzanelli CA, Hinojosa D, Castillo R, Hernandez-Cruz I, Arrieta VA, Franklin MJ, Yee D. Recent advances in neoadjuvant therapy for breast cancer. Fac Rev. 2021 Jan 4;10:2. doi: 10.12703/r/10-2. PMID: 33659921; PMCID: PMC7894264.
Harrison KS, Zhu L, Thunuguntla P, Jones C. Herpes simplex virus 1 regulates β-catenin expression in TG neurons during the latency-reactivation cycle. PLoS One. 2020 Mar 30;15(3):e0230870. doi: 10.1371/journal.pone.0230870. PMID: 32226020; PMCID: PMC7105109.
Sawant L, Wijesekera N, Jones C. Pioneer transcription factors, progesterone receptor and Krüppel like transcription factor 4, cooperatively stimulate the bovine herpesvirus 1 ICP0 early promoter and productive late protein expression. Virus Res. 2020 Oct 15;288:198115. doi: 10.1016/j.virusres.2020.198115. Epub 2020 Aug 11. PMID: 32795492.
Sawant L, Thunuguntla P, Jones C. Cooperative activation of bovine herpesvirus 1 productive infection and viral regulatory promoters by androgen receptor and Krüppel-like transcription factors 4 and 15. Virology. 2021 Jan 2;552:63-72. doi: 10.1016/j.virol.2020.08.015. Epub 2020 Oct 7. PMID: 33065464.
Zhao J, Zhu L, Wijesekera N, Jones C. Specific Akt Family Members Impair Stress-Mediated Transactivation of Viral Promoters and Enhance Neuronal Differentiation: Important Functions for Maintaining Latency. J Virol. 2020 Oct 14;94(21):e00901-20. doi: 10.1128/JVI.00901-20. PMID: 32796067; PMCID: PMC7565622.
Zhao J, Wijesekera N, Jones C. Inhibition of Stress-Induced Viral Promoters by a Bovine Herpesvirus 1 Non-Coding RNA and the Cellular Transcription Factor, β-Catenin. Int J Mol Sci. 2021 Jan 7;22(2):519. doi: 10.3390/ijms22020519. PMID: 33430186; PMCID: PMC7825607.
Ostler JB, Thunuguntla P, Hendrickson BY, Jones C. Transactivation of Herpes Simplex Virus 1 (HSV-1) Infected Cell Protein 4 Enhancer by Glucocorticoid Receptor and Stress-Induced Transcription Factors Requires Overlapping Krüppel-Like Transcription Factor 4/Sp1 Binding Sites. J Virol. 2021 Jan 28;95(4):e01776-20. doi: 10.1128/JVI.01776-20. PMID: 33208447; PMCID: PMC7851558.
Jørgensen TN, Kovats S, Lotter H. Editorial: Effects of Androgens on Immunity to Self and Foreign. Front Immunol. 2020 Dec 21;11:630066. doi: 10.3389/fimmu.2020.630066. PMID: 33408721; PMCID: PMC7779623.
Bajana S, Thomas K, Georgescu C, Zhao Y, Wren JD, Kovats S, Sun XH. Augmenting E Protein Activity Impairs cDC2 Differentiation at the Pre-cDC Stage. Front Immunol. 2020 Dec 18;11:577718. doi: 10.3389/fimmu.2020.577718. PMID: 33391258; PMCID: PMC7775562.
Bamunuarachchi G, Pushparaj S, Liu L. Interplay between host non-coding RNAs and influenza viruses. RNA Biol. 2021 May;18(5):767-784. doi: 10.1080/15476286.2021.1872170. Epub 2021 Jan 18. PMID: 33404285; PMCID: PMC8078518.
Tackett AP, Keller-Hamilton B, Smith CE, Hébert ET, Metcalf JP, Queimado L, Stevens EM, Wallace SW, McQuaid EL, Wagener TL. Evaluation of Respiratory Symptoms Among Youth e-Cigarette Users. JAMA Netw Open. 2020 Oct 1;3(10):e2020671. doi: 10.1001/jamanetworkopen.2020.20671. PMID: 33048131; PMCID: PMC8094411.
Patel VI, Booth JL, Dozmorov M, Brown BR, Metcalf JP. Anthrax Edema and Lethal Toxins Differentially Target Human Lung and Blood Phagocytes. Toxins (Basel). 2020 Jul 20;12(7):464. doi: 10.3390/toxins12070464. PMID: 32698436; PMCID: PMC7405021.
Bodas M, Moore AR, Subramaniyan B, Georgescu C, Wren JD, Freeman WM, Brown BR, Metcalf JP, Walters MS. Cigarette Smoke Activates NOTCH3 to Promote Goblet Cell Differentiation in Human Airway Epithelial Cells. Am J Respir Cell Mol Biol. 2021 Apr;64(4):426-440. doi: 10.1165/rcmb.2020-0302OC. PMID: 33444514; PMCID: PMC8008804.
Singh MP, Sethuraman SN, Miller C, Malayer J, Ranjan A. Boiling histotripsy and in-situ CD40 stimulation improve the checkpoint blockade therapy of poorly immunogenic tumors. Theranostics. 2021 Jan 1;11(2):540-554. doi: 10.7150/thno.49517. PMID: 33391491; PMCID: PMC7738858.
Wu L, Lu P, Guo X, Song K, Lyu Y, Bothwell J, Wu J, Hawkins O, Clarke SL, Lucas EA, Smith BJ, Chowanadisai W, Hartson SD, Ritchey JW, Wang W, Medeiros DM, Li S, Lin D. β-carotene oxygenase 2 deficiency-triggered mitochondrial oxidative stress promotes low-grade inflammation and metabolic dysfunction. Free Radic Biol Med. 2021 Feb 20;164:271-284. doi: 10.1016/j.freeradbiomed.2021.01.003. Epub 2021 Jan 13. PMID: 33453359; PMCID: PMC7946548.
Singh MP, Flynn NH, Sethuraman SN, Manouchehri S, Ritchey J, Liu J, Ramsey JD, Pope C, Ranjan A. Reprogramming the rapid clearance of thrombolytics by nanoparticle encapsulation and anchoring to circulating red blood cells. J Control Release. 2021 Jan 10;329:148-161. doi: 10.1016/j.jconrel.2020.11.034. Epub 2020 Nov 18. PMID: 33217476.
Chien RC, Ritchey JW. Pathology in Practice. J Am Vet Med Assoc. 2020 May 1;256(9):995-998. doi: 10.2460/javma.256.9.995. PMID: 32301655.
Ojo BA, Lu P, Alake SE, Keirns B, Anderson K, Gallucci G, Hart MD, El-Rassi GD, Ritchey JW, Chowanadisai W, Lin D, Clarke S, Smith BJ, Lucas EA. Pinto beans modulate the gut microbiome, augment MHC II protein, and antimicrobial peptide gene expression in mice fed a normal or western-style diet. J Nutr Biochem. 2021 Feb;88:108543. doi: 10.1016/j.jnutbio.2020.108543. Epub 2020 Nov 1. PMID: 33144228.
Ojo BA, Lu P, Alake SE, Keirns B, Anderson K, Gallucci G, Hart MD, El-Rassi GD, Ritchey JW, Chowanadisai W, Lin D, Clarke S, Smith BJ, Lucas EA. Pinto beans modulate the gut microbiome, augment MHC II protein, and antimicrobial peptide gene expression in mice fed a normal or western-style diet. J Nutr Biochem. 2021 Feb;88:108543. doi: 10.1016/j.jnutbio.2020.108543. Epub 2020 Nov 1. PMID: 33144228.
Singh MP, Flynn NH, Sethuraman SN, Manouchehri S, Ritchey J, Liu J, Ramsey JD, Pope C, Ranjan A. Reprogramming the rapid clearance of thrombolytics by nanoparticle encapsulation and anchoring to circulating red blood cells. J Control Release. 2021 Jan 10;329:148-161. doi: 10.1016/j.jconrel.2020.11.034. Epub 2020 Nov 18. PMID: 33217476.
Anderson EJ, DeVincenzo JP, Simões EAF, Krilov LR, Forbes ML, Pannaraj PS, Espinosa CM, Welliver RC, Wolkoff LI, Yogev R, Checchia PA, Domachowske JB, Halasa N, McBride SJ, Kumar VR, McLaurin KK, Rizzo CP, Ambrose CS. SENTINEL1: Two-Season Study of Respiratory Syncytial Virus Hospitalizations among U.S. Infants Born at 29 to 35 Weeks' Gestational Age Not Receiving Immunoprophylaxis. Am J Perinatol. 2020 Mar;37(4):421-429. doi: 10.1055/s-0039-1681014. Epub 2019 Apr 16. PMID: 30991438.
- Center Investigators
Al Mubarak ZH, Premaratne G, Dharmaratne A, Mohammadparast F, Andiappan M, Krishnan S. Plasmonic nucleotide hybridization chip for attomolar detection: localized gold and tagged core/shell nanomaterials. Lab Chip. 2020 Feb 21;20(4):717-721. doi: 10.1039/c9lc01150a. Epub 2020 Feb 3. PMID: 32009138.
Ferencz B, Condac E, Poudel N, Munteanu MC, Sivasami P, Choudhury B, Naidu NN, Zhang F, Breshears M, Linhardt RJ, Hinsdale ME. Xylosyltransferase 2 deficiency and organ homeostasis. Glycoconj J. 2020 Dec;37(6):755-765. doi: 10.1007/s10719-020-09945-9. Epub 2020 Sep 23. PMID: 32965647.
Thompson LR, Oliveira TG, Hermann ER, Chowanadisai W, Clarke SL, Montgomery MR. Distinct TP53 Mutation Types Exhibit Increased Sensitivity to Ferroptosis Independently of Changes in Iron Regulatory Protein Activity. Int J Mol Sci. 2020 Sep 15;21(18):6751. doi: 10.3390/ijms21186751. PMID: 32942535; PMCID: PMC7555626.
Ridpath JF, Fulton RW, Bauermann FV, Falkenberg SM, Welch J, Confer AW. Sequential exposure to bovine viral diarrhea virus and bovine coronavirus results in increased respiratory disease lesions: clinical, immunologic, pathologic, and immunohistochemical findings. J Vet Diagn Invest. 2020 Jul;32(4):513-526. doi: 10.1177/1040638720918561. Epub 2020 Jun 2. PMID: 32484424; PMCID: PMC7438645.
Deole R, Hoff WD. A potassium chloride to glycine betaine osmoprotectant switch in the extreme halophile Halorhodospira halophila. Sci Rep. 2020 Feb 25;10(1):3383. doi: 10.1038/s41598-020-59231-9. PMID: 32098991; PMCID: PMC7042295.
Dou X, Nath D, Shin H, Nurmemmedov E, Bourne PC, Ma JX, Duerfeldt AS. Evolution of a 4-Benzyloxy-benzylamino Chemotype to Provide Efficacious, Potent, and Isoform Selective PPARα Agonists as Leads for Retinal Disorders. J Med Chem. 2020 Mar 26;63(6):2854-2876. doi: 10.1021/acs.jmedchem.9b01189. Epub 2020 Mar 10. PMID: 32096640; PMCID: PMC7365701.
Dou X, Duerfeldt AS. Small-Molecule Modulation of PPARs for the Treatment of Prevalent Vascular Retinal Diseases. Int J Mol Sci. 2020 Dec 4;21(23):9251. doi: 10.3390/ijms21239251. PMID: 33291567; PMCID: PMC7730325.
Willis EL, Eberle R, Wolf RF, White GL, McFarlane D. Effects of Chronic Viral Infection on Lymphocyte Populations in Middle-aged Baboons (Papio anubis). Comp Med. 2021 Apr 1;71(2):177-187. doi: 10.30802/AALAS-CM-20-000068. Epub 2021 Feb 12. PMID: 33579397; PMCID: PMC8063200.
Makkar A, Milsten J, McCoy M, Szyld EG, Lapadula MC, Ganguly A, DeShea LA, Ponniah U. Tele-Echocardiography for Congenital Heart Disease Screening in a Level II Neonatal Intensive Care Unit with Hybrid Telemedicine System. Telemed J E Health. 2021 Jan 15. doi: 10.1089/tmj.2020.0440. Epub ahead of print. PMID: 33449839.
Griffin MP, Yuan Y, Takas T, Domachowske JB, Madhi SA, Manzoni P, Simões EAF, Esser MT, Khan AA, Dubovsky F, Villafana T, DeVincenzo JP; Nirsevimab Study Group. Single-Dose Nirsevimab for Prevention of RSV in Preterm Infants. N Engl J Med. 2020 Jul 30;383(5):415-425. doi: 10.1056/NEJMoa1913556. Erratum in: N Engl J Med. 2020 Aug 13;383(7):698. PMID: 32726528.
Reynisson B, Barra C, Kaabinejadian S, Hildebrand WH, Peters B, Nielsen M. Improved Prediction of MHC II Antigen Presentation through Integration and Motif Deconvolution of Mass Spectrometry MHC Eluted Ligand Data. J Proteome Res. 2020 Jun 5;19(6):2304-2315. doi: 10.1021/acs.jproteome.9b00874. Epub 2020 Apr 30. PMID: 32308001.
Tanno H, Gould TM, McDaniel JR, Cao W, Tanno Y, Durrett RE, Park D, Cate SJ, Hildebrand WH, Dekker CL, Tian L, Weyand CM, Georgiou G, Goronzy JJ. Determinants governing T cell receptor α/β-chain pairing in repertoire formation of identical twins. Proc Natl Acad Sci U S A. 2020 Jan 7;117(1):532-540. doi: 10.1073/pnas.1915008117. Epub 2019 Dec 26. PMID: 31879353; PMCID: PMC6955297.
Puig M, Ananthula S, Venna R, Kumar Polumuri S, Mattson E, Walker LM, Cardone M, Takahashi M, Su S, Boyd LF, Natarajan K, Abdoulaeva G, Wu WW, Roderiquez G, Hildebrand WH, Beaucage SL, Li Z, Margulies DH, Norcross MA. Alterations in the HLA-B*57:01 Immunopeptidome by Flucloxacillin and Immunogenicity of Drug-Haptenated Peptides. Front Immunol. 2021 Feb 9;11:629399. doi: 10.3389/fimmu.2020.629399. PMID: 33633747; PMCID: PMC7900192.
Munteanu MC, Huang C, Liang Y, Sathiaseelan R, Zeng X, Liu L. Long non-coding RNA FENDRR regulates IFNγ-induced M1 phenotype in macrophages. Sci Rep. 2020 Aug 13;10(1):13672. doi: 10.1038/s41598-020-70633-7. PMID: 32792604; PMCID: PMC7426844.
Huang C, Liang Y, Zeng X, Yang X, Xu D, Gou X, Sathiaseelan R, Senavirathna LK, Wang P, Liu L. Long Noncoding RNA FENDRR Exhibits Antifibrotic Activity in Pulmonary Fibrosis. Am J Respir Cell Mol Biol. 2020 Apr;62(4):440-453. doi: 10.1165/rcmb.2018-0293OC. PMID: 31697569; PMCID: PMC7110975.
Bamunuarachchi G, Yang X, Huang C, Liang Y, Guo Y, Liu L. MicroRNA-206 inhibits influenza A virus replication by targeting tankyrase 2. Cell Microbiol. 2021 Feb;23(2):e13281. doi: 10.1111/cmi.13281. Epub 2020 Nov 4. PMID: 33099847; PMCID: PMC8279255.
Yang X, Liang Y, Bamunuarachchi G, Xu Y, Vaddadi K, Pushparaj S, Xu D, Zhu Z, Blaha R, Huang C, Liu L. miR-29a is a negative regulator of influenza virus infection through targeting of the frizzled 5 receptor. Arch Virol. 2021 Feb;166(2):363-373. doi: 10.1007/s00705-020-04877-z. Epub 2020 Nov 18. PMID: 33206218; PMCID: PMC8075052.
Miao Z, Cao X, Jiang H. Digestion-related proteins in the tobacco hornworm, Manduca sexta. Insect Biochem Mol Biol. 2020 Nov;126:103457. doi: 10.1016/j.ibmb.2020.103457. Epub 2020 Aug 27. PMID: 32860882; PMCID: PMC7554134.
Cao X, Wang Y, Rogers J, Hartson S, Kanost MR, Jiang H. Changes in composition and levels of hemolymph proteins during metamorphosis of Manduca sexta. Insect Biochem Mol Biol. 2020 Dec;127:103489. doi: 10.1016/j.ibmb.2020.103489. Epub 2020 Oct 20. PMID: 33096211; PMCID: PMC7704632.
Wang Y, Yang F, Cao X, Zou Z, Lu Z, Kanost MR, Jiang H. Hemolymph protease-5 links the melanization and Toll immune pathways in the tobacco hornworm, Manduca sexta. Proc Natl Acad Sci U S A. 2020 Sep 22;117(38):23581-23587. doi: 10.1073/pnas.2004761117. Epub 2020 Sep 8. PMID: 32900946; PMCID: PMC7519321.
Walker A, Walgama C, Nerimetla R, Habib Alavi S, Echeverria E, Harimkar SP, McIlroy DN, Krishnan S. Roughened graphite biointerfaced with P450 liver microsomes: Surface and electrochemical characterizations. Colloids Surf B Biointerfaces. 2020 May;189:110790. doi: 10.1016/j.colsurfb.2020.110790. Epub 2020 Jan 28. PMID: 32028130.
Narayanan S, Ritchey JC, Patil G, Narasaraju T, More S, Malayer J, Saliki J, Kaul A, Agarwal PK, Ramachandran A. SARS-CoV-2 Genomes From Oklahoma, United States. Front Genet. 2021 Feb 3;11:612571. doi: 10.3389/fgene.2020.612571. PMID: 33613621; PMCID: PMC7886813.
McGuire MK, Seppo A, Goga A, Buonsenso D, Collado MC, Donovan SM, Müller JA, Ofman G, Monroy-Valle M, O'Connor DL, Pace RM, Van de Perre P. Best Practices for Human Milk Collection for COVID-19 Research. Breastfeed Med. 2021 Jan;16(1):29-38. doi: 10.1089/bfm.2020.0296. Epub 2020 Dec 30. PMID: 33393841; PMCID: PMC7826442.
Pelletier DA, Li Z, Lu TS, Zhang L, Hu Z, Morris GP, Glavina Del Rio T, Wang D, Chen JG, Pan C. Genome Sequences of 42 Bacteria Isolated from Sorghum bicolor Roots. Microbiol Resour Announc. 2020 Sep 10;9(37):e00736-20. doi: 10.1128/MRA.00736-20. PMID: 32912912; PMCID: PMC7484071.
Badré A, Zhang L, Muchero W, Reynolds JC, Pan C. Deep neural network improves the estimation of polygenic risk scores for breast cancer. J Hum Genet. 2021 Apr;66(4):359-369. doi: 10.1038/s10038-020-00832-7. Epub 2020 Oct 2. PMID: 33009504.
Chinnappan M, Srivastava A, Amreddy N, Razaq M, Pareek V, Ahmed R, Mehta M, Peterson JE, Munshi A, Ramesh R. Exosomes as drug delivery vehicle and contributor of resistance to anticancer drugs. Cancer Lett. 2020 Aug 28;486:18-28. doi: 10.1016/j.canlet.2020.05.004. Epub 2020 May 19. PMID: 32439419; PMCID: PMC7327711.
Srivastava A, Rathore S, Munshi A, Ramesh R. Extracellular Vesicles in Oncology: from Immune Suppression to Immunotherapy. AAPS J. 2021 Feb 14;23(2):30. doi: 10.1208/s12248-021-00554-4. PMID: 33586060; PMCID: PMC7882565.
Ahmed R, Muralidharan R, Srivastava A, Johnston SE, Zhao YD, Ekmekcioglu S, Munshi A, Ramesh R. Molecular Targeting of HuR Oncoprotein Suppresses MITF and Induces Apoptosis in Melanoma Cells. Cancers (Basel). 2021 Jan 6;13(2):166. doi: 10.3390/cancers13020166. PMID: 33418925; PMCID: PMC7825065.
Ramesh R, Ahmed R, Munshi A. Interleukin (IL)-24: Reconfiguring the Tumor Microenvironment for Eliciting Antitumor Response. Adv Exp Med Biol. 2021;1290:99-110. doi: 10.1007/978-3-030-55617-4_7. PMID: 33559858.
Salati MA, Khazai J, Tahmuri AM, Samadi A, Taghizadeh A, Taghizadeh M, Zarrintaj P, Ramsey JD, Habibzadeh S, Seidi F, Saeb MR, Mozafari M. Agarose-Based Biomaterials: Opportunities and Challenges in Cartilage Tissue Engineering. Polymers (Basel). 2020 May 18;12(5):1150. doi: 10.3390/polym12051150. PMID: 32443422; PMCID: PMC7285176.
Lam AK, Panlilio H, Pusavat J, Wouters CL, Moen EL, Brennan RE, Rice CV. Expanding the Spectrum of Antibiotics Capable of Killing Multidrug-Resistant Staphylococcus aureus and Pseudomonas aeruginosa. ChemMedChem. 2020 Aug 5;15(15):1421-1428. doi: 10.1002/cmdc.202000239. Epub 2020 Jun 26. PMID: 32497366; PMCID: PMC7485129.
Lam AK, Panlilio H, Pusavat J, Wouters CL, Moen EL, Rice CV. Overcoming Multidrug Resistance and Biofilms of Pseudomonas aeruginosa with a Single Dual-Function Potentiator of β-Lactams. ACS Infect Dis. 2020 May 8;6(5):1085-1097. doi: 10.1021/acsinfecdis.9b00486. Epub 2020 Apr 6. PMID: 32223216; PMCID: PMC7233300.
Lam AK, Moen EL, Pusavat J, Wouters CL, Panlilio H, Ferrell MJ, Houck MB, Glatzhofer DT, Rice CV. PEGylation of Polyethylenimine Lowers Acute Toxicity while Retaining Anti-Biofilm and β-Lactam Potentiation Properties against Antibiotic-Resistant Pathogens. ACS Omega. 2020 Sep 29;5(40):26262-26270. doi: 10.1021/acsomega.0c04111. PMID: 33073153; PMCID: PMC7557992.
Panlilio H, Rice CV. The role of extracellular DNA in the formation, architecture, stability, and treatment of bacterial biofilms. Biotechnol Bioeng. 2021 Jun;118(6):2129-2141. doi: 10.1002/bit.27760. Epub 2021 Mar 27. PMID: 33748946.
Pulavendran S, Prasanthi M, Ramachandran A, Grant R, Snider TA, Chow VTK, Malayer JR, Teluguakula N. Production of Neutrophil Extracellular Traps Contributes to the Pathogenesis of Francisella tularemia. Front Immunol. 2020 Apr 24;11:679. doi: 10.3389/fimmu.2020.00679. PMID: 32391009; PMCID: PMC7193117.
Agarwal G, Kudapa H, Ramalingam A, Choudhary D, Sinha P, Garg V, Singh VK, Patil GB, Pandey MK, Nguyen HT, Guo B, Sunkar R, Niederhuth CE, Varshney RK. Epigenetics and epigenomics: underlying mechanisms, relevance, and implications in crop improvement. Funct Integr Genomics. 2020 Nov;20(6):739-761. doi: 10.1007/s10142-020-00756-7. Epub 2020 Oct 21. PMID: 33089419.
Suo A, Lan Z, Lu C, Zhao Z, Pu D, Wu X, Jiang B, Zhou N, Ding H, Zhou D, Liao P, Sunkar R, Zheng Y. Characterizing microRNAs and their targets in different organs of Camellia sinensis var. assamica. Genomics. 2021 Jan;113(1 Pt 1):159-170. doi: 10.1016/j.ygeno.2020.11.020. Epub 2020 Nov 27. PMID: 33253793.
Al-Harrasi I, Patankar HV, Al-Yahyai R, Sunkar R, Krishnamurthy P, Kumar PP, Yaish MW. Molecular Characterization of a Date Palm Vascular Highway 1-Interacting Kinase (PdVIK) Under Abiotic Stresses. Genes (Basel). 2020 May 19;11(5):568. doi: 10.3390/genes11050568. PMID: 32438658; PMCID: PMC7288329.
Harb A, Simpson C, Guo W, Govindan G, Kakani VG, Sunkar R. The Effect of Drought on Transcriptome and Hormonal Profiles in Barley Genotypes With Contrasting Drought Tolerance. Front Plant Sci. 2020 Dec 23;11:618491. doi: 10.3389/fpls.2020.618491. PMID: 33424910; PMCID: PMC7786106.
Dunigan-Russell K, Silverberg M, Lin VY, Li R, Wall SB, Li Q, Nicola T, Gotham J, Crowe DR, Vitiello PF, Agarwal A, Tipple TE. Club Cell Heme Oxygenase-1 Deletion: Effects in Hyperoxia-Exposed Adult Mice. Oxid Med Cell Longev. 2020 Jun 9;2020:2908271. doi: 10.1155/2020/2908271. PMID: 32587658; PMCID: PMC7303751.
Harer MW, Charlton JR, Tipple TE, Reidy KJ. Preterm birth and neonatal acute kidney injury: implications on adolescent and adult outcomes. J Perinatol. 2020 Sep;40(9):1286-1295. doi: 10.1038/s41372-020-0656-7. Epub 2020 Apr 10. PMID: 32277164.
Gentle SJ, Tipple TE, Patel R. Neonatal comorbidities and gasotransmitters. Nitric Oxide. 2020 Apr 1;97:27-32. doi: 10.1016/j.niox.2020.01.012. Epub 2020 Jan 31. PMID: 32014495.
Sherlock LG, Sjostrom K, Sian L, Delaney C, Tipple TE, Krebs NF, Nozik-Grayck E, Wright CJ. Hepatic-Specific Decrease in the Expression of Selenoenzymes and Factors Essential for Selenium Processing After Endotoxemia. Front Immunol. 2020 Nov 5;11:595282. doi: 10.3389/fimmu.2020.595282. PMID: 33224150; PMCID: PMC7674557.
Dunigan-Russell K, Lin V, Silverberg M, Wall SB, Li R, Gotham J, Nicola T, Sridharan A, Snowball J, Delaney C, Li Q, Tipple TE. Aurothioglucose enhances proangiogenic pathway activation in lungs from room air and hyperoxia-exposed newborn mice. Am J Physiol Lung Cell Mol Physiol. 2020 Jun 1;318(6):L1165-L1171. doi: 10.1152/ajplung.00086.2020. Epub 2020 Apr 15. PMID: 32292070; PMCID: PMC7347274.
Staples S, Wall SB, Li R, Tipple TE. Selenium-independent antioxidant and anti-inflammatory effects of thioredoxin reductase inhibition in alveolar macrophages. Life Sci. 2020 Oct 15;259:118285. doi: 10.1016/j.lfs.2020.118285. Epub 2020 Aug 13. PMID: 32798556.
Robbins ME, Cho HY, Hansen JM, Luchsinger JR, Locy ML, Velten M, Kleeberger SR, Rogers LK, Tipple TE. Glutathione reductase deficiency alters lung development and hyperoxic responses in neonatal mice. Redox Biol. 2021 Jan;38:101797. doi: 10.1016/j.redox.2020.101797. Epub 2020 Nov 13. PMID: 33254076; PMCID: PMC7708869.
Wu W, Zhang W, Tian L, Brown BR, Walters MS, Metcalf JP. IRF7 Is Required for the Second Phase Interferon Induction during Influenza Virus Infection in Human Lung Epithelia. Viruses. 2020 Mar 29;12(4):377. doi: 10.3390/v12040377. PMID: 32235406; PMCID: PMC7232147.
Saxena A, Walters MS, Shieh JH, Shen LB, Gomi K, Downey RJ, Crystal RG, Moore MAS. Extracellular vesicles from human airway basal cells respond to cigarette smoke extract and affect vascular endothelial cells. Sci Rep. 2021 Mar 17;11(1):6104. doi: 10.1038/s41598-021-85534-6. PMID: 33731767; PMCID: PMC7969738.
Wu W, Metcalf JP. The Role of Type I IFNs in Influenza: Antiviral Superheroes or Immunopathogenic Villains? 2020 Jun 19. Peer-reviewed Manuscript.
Bergstrom K, Shan X, Casero D, Batushansky A, Lagishetty V, Jacobs JP, Hoover C, Kondo Y, Shao B, Gao L, Zandberg W, Noyovitz B, McDaniel JM, Gibson DL, Pakpour S, Kazemian N, McGee S, Houchen CW, Rao CV, Griffin TM, Sonnenburg JL, McEver RP, Braun J, Xia L. Proximal colon-derived O-glycosylated mucus encapsulates and modulates the microbiota. Science. 2020 Oct 23;370(6515):467-472. doi: 10.1126/science.aay7367. PMID: 33093110; PMCID: PMC8132455.
Smiley Evans T, Shi Z, Boots M, Liu W, Olival KJ, Xiao X, Vandewoude S, Brown H, Chen JL, Civitello DJ, Escobar L, Grohn Y, Li H, Lips K, Liu Q, Lu J, Martínez-López B, Shi J, Shi X, Xu B, Yuan L, Zhu G, Getz WM. Synergistic China-US Ecological Research is Essential for Global Emerging Infectious Disease Preparedness. Ecohealth. 2020 Mar;17(1):160-173. doi: 10.1007/s10393-020-01471-2. Epub 2020 Feb 3. PMID: 32016718; PMCID: PMC7088356.
Wang X, Xiao X, Zou Z, Dong J, Qin Y, Doughty RB, Menarguez MA, Chen B, Wang J, Ye H, Ma J, Zhong Q, Zhao B, Li B. Gainers and losers of surface and terrestrial water resources in China during 1989-2016. Nat Commun. 2020 Jul 10;11(1):3471. doi: 10.1038/s41467-020-17103-w. PMID: 32651358; PMCID: PMC7351719.
Xin F, Xiao X, Dong J, Zhang G, Zhang Y, Wu X, Li X, Zou Z, Ma J, Du G, Doughty RB, Zhao B, Li B. Large increases of paddy rice area, gross primary production, and grain production in Northeast China during 2000-2017. Sci Total Environ. 2020 Apr 1;711:135183. doi: 10.1016/j.scitotenv.2019.135183. Epub 2019 Nov 21. PMID: 32000350.
Wang X, Xiao X, Zou Z, Hou L, Qin Y, Dong J, Doughty RB, Chen B, Zhang X, Chen Y, Ma J, Zhao B, Li B. Mapping coastal wetlands of China using time series Landsat images in 2018 and Google Earth Engine. ISPRS J Photogramm Remote Sens. 2020 May;163:312-326. doi: 10.1016/j.isprsjprs.2020.03.014. Epub 2020 Mar 2. PMID: 32405155; PMCID: PMC7220062.
Xu X, Hua H, Wang L, He P, Zhang L, Qin Q, Yu C, Wang X, Zhang G, Liu Y. Holly polyphenols alleviate intestinal inflammation and alter microbiota composition in lipopolysaccharide-challenged pigs. Br J Nutr. 2020 Apr 28;123(8):881-891. doi: 10.1017/S0007114520000082. Epub 2020 Jan 13. PMID: 31928547.
Robinson K, Xiao Y, Johnson TJ, Chen B, Yang Q, Lyu W, Wang J, Fansler N, Becker S, Liu J, Yang H, Zhang G. Chicken Intestinal Mycobiome: Initial Characterization and Its Response to Bacitracin Methylene Disalicylate. Appl Environ Microbiol. 2020 Jun 17;86(13):e00304-20. doi: 10.1128/AEM.00304-20. PMID: 32358003; PMCID: PMC7301856.
Xiao K, Xu Q, Liu C, He P, Qin Q, Zhu H, Zhang J, Gin A, Zhang G, Liu Y. Docosahexaenoic acid alleviates cell injury and improves barrier function by suppressing necroptosis signalling in TNF-α-challenged porcine intestinal epithelial cells. Innate Immun. 2020 Nov;26(8):653-665. doi: 10.1177/1753425920966686. Epub 2020 Oct 27. PMID: 33106070; PMCID: PMC7787556.
Liu J, Stewart SN, Robinson K, Yang Q, Lyu W, Whitmore MA, Zhang G. Linkage between the intestinal microbiota and residual feed intake in broiler chickens. J Anim Sci Biotechnol. 2021 Feb 11;12(1):22. doi: 10.1186/s40104-020-00542-2. PMID: 33573700; PMCID: PMC7879522.